Workflows

GO Enrichment Analysis Tutorial

Associated Tutorial

This workflows is part of the tutorial GO Enrichment Workflow, available in the GTN

Thanks to...

Tutorial Author(s): IGC Bioinformatics Unit, Maria Doyle ...

Starting from the BAM files produced by snippy, generate a table that summarizes the drug-resistance profile for each sample

Associated Tutorial

This workflows is part of the tutorial From BAMs to drug resistance prediction with TB-profiler, available in the GTN

Thanks to...

Tutorial Author(s): [Galo A. ...

Associated Tutorial

This workflows is part of the tutorial Intro_To_CNN_v1.0.11.0, available in the GTN

Features

• Includes Galaxy Workflow Tests

Thanks to...

Tutorial Author(s): Kaivan Kamali ...

Retrieve climate data from Copernicus

Associated Tutorial

This workflows is part of the tutorial Retrieve climate data from Copernicus, available in the GTN

Thanks to...

Tutorial Author(s): Bérénice Batut, [Helena ...

Visualization of RNA-Seq results with heatmap2

Associated Tutorial

This workflows is part of the tutorial Heatmap2 Workflow, available in the GTN

Features

• Includes Galaxy Workflow Tests

Thanks to...

Tutorial Author(s): [Maria ...

Given a set of VCF files and the reference genome used to do the mapping and SNP calling, create a multifasta file containing the genomes of all samples and calculate the matrix of pairwise SNP distances

Associated Tutorial

This workflows is part of the tutorial From VCFs to SNP distance matrix, available in the GTN

Thanks to...

**Tutorial ...

In this workflow the similarity among set of search queries (e.g. genes) is analyzed based on the associated vocabulary in PubMed. The last tool is an interactive tool that enables the inspection of the data.

Associated Tutorial

This workflows is part of the tutorial Simtext training workflow, available in the GTN

Thanks to...

**Tutorial ...