High Throughput Molecular Dynamics and Analysis

Associated Tutorial

This workflows is part of the tutorial MD protein-ligand workflow (from PDB structure), available in the GTN

Thanks to...

Tutorial Author(s): Simon Bray, [Tharindu ...

Running molecular dynamics simulations using GROMACS

Associated Tutorial

This workflows is part of the tutorial GROMACS Training Workflow, available in the GTN

Features

• Includes Galaxy Workflow Tests

Thanks to...

**Tutorial ...

Analysis of MD trajectories using MDAnalysis, generating a Ramachandran plot and various timeseries.

Associated Tutorial

This workflows is part of the tutorial Analysis using MDAnalysis, available in the GTN

Features

• Includes Galaxy Workflow Tests ...

Analysis of molecular dynamics simulations

Associated Tutorial

This workflows is part of the tutorial Simple Analysis, available in the GTN

Features

• Includes Galaxy Workflow Tests

Thanks to...

Tutorial Author(s): [Christopher ...

Protein target prediction of a bioactive ligand with Align-it and ePharmaLib

Associated Tutorial

This workflows is part of the tutorial Zauberkugel, available in the GTN

Thanks to...

Tutorial Author(s): Aurélien F. A. Moumbock, [Simon ...

Virtual screening of the SARS-CoV-2 main protease with rDock and pose scoring

Associated Tutorial

This workflows is part of the tutorial Virtual screening of the SARS-CoV-2 main protease with rDock and pose scoring, available in the GTN

Thanks to...

Tutorial Author(s): Simon Bray ...

CTB Unittest workflow

Associated Tutorial

This workflows is part of the tutorial CTB Workflow, available in the GTN

Thanks to...

Tutorial Author(s): Simon Bray

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Running molecular dynamics simulations using NAMD

Associated Tutorial

This workflows is part of the tutorial NAMD MD From CHARMM GUI, available in the GTN

Thanks to...

Tutorial Author(s): Christopher Barnett, [Tharindu ...

Running molecular dynamics simulations using NAMD

Associated Tutorial

This workflows is part of the tutorial MD NAMD, available in the GTN

Thanks to...

Tutorial Author(s): Christopher Barnett, [Tharindu ...

High Throughput Molecular Dynamics and Analysis

Associated Tutorial

This workflows is part of the tutorial Workflow constructed from history 'Hsp90-MDAnalysis', available in the GTN

Thanks to...

Tutorial Author(s): Simon Bray, [Tharindu ...