nf-core/ddamsproteomics

Quantitative shotgun MS proteomics as done in Lehtio lab

Introduction

The pipeline is built using Nextflow, a workflow tool to run tasks across multiple compute infrastructures in a very portable manner. It comes with docker / singularity containers making installation trivial and results highly reproducible.

Documentation

The nf-core/ddamsproteomics pipeline comes with documentation about the pipeline, found in the docs/ directory:

Installation Pipeline configuration

Local ...