Workflows
What is a Workflow?Filters
Query
Created At
Updated At
Tool
CNVkit1
Workflow type
Galaxy1
Submitter
Khaled Jum'ah1
Space
Galaxy1
Topic annotations
Copy number variation1
Operation annotations
Copy number estimation1
Copy number variation detection1
Structural variation detection1
Maturity
Stable1
1
Workflow visible to you, out of a total of 1
Stable
This Galaxy workflow streamlines comprehensive copy number variation (CNV) analysis by integrating CNVkit’s robust detection capabilities with an efficient conversion step using cnv-vcf2json to format results into Beacon JSON. Designed for computational biologists and bioinformaticians, the workflow standardizes CNV identification and output formatting to enhance interoperability with Beacon networks. It is specifically optimized for use with mapped BAM files from the EGAD00001008392 synthetic ...
