Workflows
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Created At
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Workflow type
Python1
Tag
data annotation1
data fusion1
protein interactin data triplification1
protein interactions database integration1
Submitter
Yasmmin Martins1
Space
Independent Teams1
Topic annotations
Relation extraction1
Operation annotations
Relation extraction1
Data retrieval3
Gene-set enrichment analysis2
Modelling and simulation2
Prediction and recognition2
Protein interaction network analysis2
Protein interaction network prediction2
Expression correlation analysis1
Named-entity and concept recognition1
Protein-protein interaction analysis1
Text annotation1
Text mining1
More...
Maturity
Stable1
1
Workflow matching the given criteria:
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Operation annotations:
Relation extraction1
Stable
Summary
This pipeline has as major goal provide a tool for protein interactions (PPI) prediction data formalization and standardization using the OntoPPI ontology. This pipeline is splitted in two parts: (i) a part to prepare data from three main sources of PPI data (HINT, STRING and PredPrin) and create the standard files to be processed ...
