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BioBB Building Blocks (Project)
Description: The [BioExcel Building Blocks (biobb)](https://mmb.irbbarcelona.org/biobb/) software library is a collection of Python...
SEEK ID: https://workflowhub.eu/projects/11
Description: The [BioExcel Building Blocks (biobb)](https://mmb.irbbarcelona.org/biobb/) software library is a collection of Python...
SEEK ID: https://workflowhub.eu/projects/11
- BioExcel
- BioBB Building Blocks
- BioExcel Building Blocks, a software library for interoperable biomolecular simulation workflows
- Making Canonical Workflow Building Blocks interoperable across workflow languages
- Computational biomolecular simulation workflows with BioExcel Building Blocks - Part 1
- Computational biomolecular simulation workflows with BioExcel Building Blocks - Part 2
- Documentation for BioExcel Building Blocks (BioBB)
- Protein MD Setup tutorial using BioExcel Building Blocks (biobb) in CWL
- Jupyter Notebook GMX Notebook Automatic Ligand Parameterization tutorial
- Jupyter Notebook Mutation Free Energy Calculations
- Jupyter Notebook Protein Ligand Complex MD Setup tutorial
- Example of setting up a simulation system
- Jupyter Notebook Protein MD Setup tutorial
- Molecular Dynamics Simulation
- Jupyter Notebook Protein-ligand Docking tutorial (Cluster90)
- Jupyter Notebook Protein-ligand Docking tutorial (PDBe REST API)
- Jupyter Notebook Protein-ligand Docking tutorial (Fpocket)
- Jupyter Notebook Amber Protein MD Setup tutorial
- Jupyter Notebook Amber Protein Ligand Complex MD Setup tutorial
- Jupyter Notebook Amber Constant pH MD Setup tutorial
- Protein MD Setup tutorial using BioExcel Building Blocks (biobb) in Galaxy
- Jupyter Notebook Structural DNA helical parameters tutorial
- Jupyter Notebook ABC MD Setup tutorial
- Protein MD Setup HPC tutorial using BioExcel Building Blocks (biobb) in PyCOMPSs
- Protein MD Setup tutorial using BioExcel Building Blocks (biobb) in KNIME
- CWL GMX Automatic Ligand Parameterization tutorial
- Protein-ligand docking (fpocket)
- CWL Protein Ligand Complex MD Setup tutorial
- CWL Protein-ligand Docking tutorial (Fpocket)
- CWL Amber Protein MD Setup tutorial
- CWL Amber Protein Ligand Complex MD Setup tutorial
- CWL ABC MD Setup tutorial
- Python Protein MD Setup tutorial
- Galaxy Protein MD Setup tutorial
- CWL Protein MD Setup tutorial
- Python GMX Automatic Ligand Parameterization tutorial
- Python Protein Ligand Complex MD Setup tutorial
- Python Protein-ligand Docking tutorial (Fpocket)
- Python Amber Protein MD Setup tutorial
- Python Amber Protein Ligand Complex MD Setup tutorial
- Python ABC MD Setup tutorial
- Python Structural DNA helical parameters tutorial
- Python Protein MD Analysis tutorial
- CWL Protein MD Setup tutorial with mutations
- Python Protein MD Setup tutorial with mutations
- Python GMX OPLS/AA Automatic Ligand Parameterization tutorial
- Python Amber Automatic Ligand Parameterization tutorial
- Python CNS/XPLOR MD Automatic Ligand Parameterization tutorial
- Galaxy GMX Automatic Ligand Parameterization tutorial
- Galaxy Protein Ligand Complex MD Setup
- Galaxy Protein-ligand Docking tutorial (Fpocket)
- Galaxy Amber Protein MD Setup tutorial
- Galaxy Amber Protein Ligand Complex MD Setup tutorial
- Galaxy ABC MD Setup tutorial
- Python Mutation Free Energy Calculations using BioExcel Building Blocks (biobb)
- Jupyter Notebook Protein conformational ensembles generation
- Python Protein conformational ensembles generation
- CWL Protein conformational ensembles generation
- Galaxy Protein conformational ensembles generation
- Jupyter Notebook Protein Conformational Transitions calculations tutorial
- CWL Protein Conformational Transitions calculations tutorial
- Python Protein Conformational Transitions calculations tutorial
- Jupyter Notebook Macromolecular Coarse-Grained Flexibility tutorial
- CWL Macromolecular Coarse-Grained Flexibility tutorial
- Python Macromolecular Coarse-Grained Flexibility tutorial
- Galaxy Macromolecular Coarse-Grained Flexibility tutorial
- Galaxy Protein Conformational Transitions calculations tutorial
- Jupyter Notebook Classical Molecular Interaction Potentials
- Python Classical Molecular Interaction Potentials
- Jupyter Notebook Molecular Structure Checking
- CWL Molecular Structure Checking
- Python Molecular Structure Checking
- Galaxy Molecular Structure Checking
- Docker ABC MD Setup tutorial
- Docker Amber Protein Ligand Complex MD Setup tutorial
- Docker Amber Protein MD Setup tutorial
- Docker Classical Molecular Interaction Potentials
- Docker Structural DNA helical parameters tutorial
- Docker Protein conformational ensembles generation
- Docker Macromolecular Coarse-Grained Flexibility tutorial
- Docker Protein Conformational Transitions calculations tutorial
- Docker GMX Notebook Automatic Ligand Parameterization tutorial
- Docker Protein MD Setup tutorial
- Docker Mutation Free Energy Calculations
- Docker Protein Ligand Complex MD Setup tutorial
- Docker Molecular Structure Checking
- Docker Protein-ligand Docking tutorial (Fpocket)
- Tutorials for BioExcel Building Blocks (BioBB)
- BioExcel Building Blocks (BioBB) Protein MD Setup Tutorials
- Interactive Jupyter Notebooks for FAIR and reproducible biomolecular simulation workflows
- BioExcel Best Practice Guides
- BioBB Building Blocks
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