Workflows
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An analysis pipeline for Molecular Cartography data from Resolve Biosciences.
Precision HLA typing from next-generation sequencing data.
Type: Nextflow
Creators: Christopher Mohr, Alexander Peltzer, Sven Fillinger
Submitter: WorkflowHub Bot
Pipeline for the analysis of crispr data
Type: Nextflow
Creators: mirpedrol , mirpedrol , Júlia Mir Pedrol, mirpedrol , mirpedrol , Laurence Kuhlburger
Submitter: WorkflowHub Bot
16S rRNA amplicon sequencing analysis workflow using QIIME2.
[![GitHub Actions CI ...
Assembly and intrahost/low-frequency variant calling for viral samples
Type: Nextflow
Creators: Sarai Varona and Sara Monzon, Patel H, Varona S and Monzon S
Submitter: WorkflowHub Bot
Integration of viral sequences in genomic data
Small RNA-Seq Best Practice Analysis Pipeline.
Type: Nextflow
Creators: Phil Ewels <[email protected]>, P. Ewels <[email protected]>, P. Ewels, Chuan Wang <[email protected]>, C. Wang <[email protected]>, C. Wang, Rickard Hammarén <[email protected]>, R. Hammarén <[email protected]>, R. Hammarén, Lorena Pantano <[email protected]>, L. Pantano <[email protected]>, L. Pantano
Submitter: WorkflowHub Bot
SLAMseq analysis using Slamdunk with various T>C conversion quantifications and QC
Pipeline for processing 10x Genomics single cell rnaseq data
Type: Nextflow
Creators: Peter J Bailey, Bailey PJ, Alexander Peltzer, Botvinnik O, Olga Botvinnik, Marques de Almeida F, Peltzer A, Sturm G
Submitter: WorkflowHub Bot
An open-source analysis pipeline to detect germline or somatic variants from whole genome or targeted sequencing
