name: starfusion_downloadgenome
description: Download STAR-fusion genome resource required to run STAR-Fusion caller
keywords:
  - downoad
tools:
  - star-fusion:
      description: Fusion calling algorithm for RNAseq data
      homepage: https://github.com/STAR-Fusion/
      documentation: https://github.com/STAR-Fusion/STAR-Fusion/wiki/installing-star-fusion
      tool_dev_url: https://github.com/STAR-Fusion/STAR-Fusion
      doi: "10.1186/s13059-019-1842-9"
      licence: ["GPL v3"]

input:
  - fasta:
      type: file
      description: genome fasta file
      pattern: "*.{fasta}"
  - gtf:
      type: file
      description: genome gtf file
      pattern: "*.{gtf}"

output:
  - reference:
      type: directory
      description: Reference dir
      pattern: "ctat_genome_lib_build_dir"

authors:
  - "@praveenraj2018"
