# Research Object Crate for dna-seq-varlociraptor workflow

Original URL: https://workflowhub.eu/workflows/382/ro_crate?version=1

# Snakemake workflow: dna-seq-varlociraptor [![Snakemake](https://img.shields.io/badge/snakemake-≥6.3.0-brightgreen.svg)](https://snakemake.github.io) [![GitHub actions status](https://github.com/snakemake-workflows/dna-seq-varlociraptor/workflows/Tests/badge.svg?branch=master)](https://github.com/snakemake-workflows/dna-seq-varlociraptor/actions?query=branch%3Amaster+workflow%3ATests) [![DOI](https://zenodo.org/badge/DOI/10.5281/zenodo.4675661.svg)](https://doi.org/10.5281/zenodo.4675661) A Snakemake workflow for calling small and structural variants under any kind of scenario (tumor/normal, tumor/normal/relapse, germline, pedigree, populations) via the unified statistical model of [Varlociraptor](https://varlociraptor.github.io). ## Usage The usage of this workflow is described in the [Snakemake Workflow Catalog](https://snakemake.github.io/snakemake-workflow-catalog/?usage=snakemake-workflows%2Fdna-seq-varlociraptor). If you use this workflow in a paper, don't forget to give credits to the authors by citing the URL of this (original) repository and its DOI (see above).

Author
  Johannes Köster
License
  MIT

## Contents

Main Workflow: dna-seq-varlociraptor workflow
Size: 1143 bytes