{
    "name": "nf-core/bacass",
    "homePage": "https://github.com/nf-core/bacass",
    "repos": {
        "https://github.com/nf-core/modules.git": {
            "modules": {
                "nf-core": {
                    "bakta/bakta": {
                        "branch": "master",
                        "git_sha": "9d0f89b445e1f5b2fb30476f4be9a8b519c07846",
                        "installed_by": ["modules"]
                    },
                    "bakta/baktadbdownload": {
                        "branch": "master",
                        "git_sha": "7c06e6820fa3918bc28a040e794f8a2b39fabadb",
                        "installed_by": ["modules"]
                    },
                    "canu": {
                        "branch": "master",
                        "git_sha": "3f5420aa22e00bd030a2556dfdffc9e164ec0ec5",
                        "installed_by": ["modules"]
                    },
                    "dragonflye": {
                        "branch": "master",
                        "git_sha": "a3ae45e99f68e513b0feb8d5f27e2fdd0d0f083d",
                        "installed_by": ["modules"],
                        "patch": "modules/nf-core/dragonflye/dragonflye.diff"
                    },
                    "fastp": {
                        "branch": "master",
                        "git_sha": "95cf5fe0194c7bf5cb0e3027a2eb7e7c89385080",
                        "installed_by": ["fastq_trim_fastp_fastqc"]
                    },
                    "fastqc": {
                        "branch": "master",
                        "git_sha": "f4ae1d942bd50c5c0b9bd2de1393ce38315ba57c",
                        "installed_by": ["fastq_trim_fastp_fastqc"]
                    },
                    "gunzip": {
                        "branch": "master",
                        "git_sha": "3a5fef109d113b4997c9822198664ca5f2716208",
                        "installed_by": ["modules"]
                    },
                    "kraken2/kraken2": {
                        "branch": "master",
                        "git_sha": "653218e79ffa76fde20319e9062f8b8da5cf7555",
                        "installed_by": ["modules"]
                    },
                    "miniasm": {
                        "branch": "master",
                        "git_sha": "3f5420aa22e00bd030a2556dfdffc9e164ec0ec5",
                        "installed_by": ["modules"]
                    },
                    "minimap2/align": {
                        "branch": "master",
                        "git_sha": "2c2d1cf80866dbd6dd0ea5d61ddd59533a72d41e",
                        "installed_by": ["modules"]
                    },
                    "multiqc": {
                        "branch": "master",
                        "git_sha": "b7ebe95761cd389603f9cc0e0dc384c0f663815a",
                        "installed_by": ["modules"]
                    },
                    "nanoplot": {
                        "branch": "master",
                        "git_sha": "a31407dfaf0cb0d04768d5cb439fc6f4523a6981",
                        "installed_by": ["modules"],
                        "patch": "modules/nf-core/nanoplot/nanoplot.diff"
                    },
                    "porechop/porechop": {
                        "branch": "master",
                        "git_sha": "1d68c7f248d1a480c5959548a9234602b771199e",
                        "installed_by": ["modules"]
                    },
                    "prokka": {
                        "branch": "master",
                        "git_sha": "49ebda931c36c2b282f7958d00e1236b751f1031",
                        "installed_by": ["modules"]
                    },
                    "quast": {
                        "branch": "master",
                        "git_sha": "3f5420aa22e00bd030a2556dfdffc9e164ec0ec5",
                        "installed_by": ["modules"]
                    },
                    "racon": {
                        "branch": "master",
                        "git_sha": "3f5420aa22e00bd030a2556dfdffc9e164ec0ec5",
                        "installed_by": ["modules"]
                    },
                    "samtools/index": {
                        "branch": "master",
                        "git_sha": "f4596fe0bdc096cf53ec4497e83defdb3a94ff62",
                        "installed_by": ["modules"]
                    },
                    "samtools/sort": {
                        "branch": "master",
                        "git_sha": "4352dbdb09ec40db71e9b172b97a01dcf5622c26",
                        "installed_by": ["modules"]
                    },
                    "untar": {
                        "branch": "master",
                        "git_sha": "5caf7640a9ef1d18d765d55339be751bb0969dfa",
                        "installed_by": ["modules"]
                    }
                }
            },
            "subworkflows": {
                "nf-core": {
                    "fastq_trim_fastp_fastqc": {
                        "branch": "master",
                        "git_sha": "cfd937a668919d948f6fcbf4218e79de50c2f36f",
                        "installed_by": ["subworkflows"]
                    },
                    "utils_nextflow_pipeline": {
                        "branch": "master",
                        "git_sha": "5caf7640a9ef1d18d765d55339be751bb0969dfa",
                        "installed_by": ["subworkflows"]
                    },
                    "utils_nfcore_pipeline": {
                        "branch": "master",
                        "git_sha": "5caf7640a9ef1d18d765d55339be751bb0969dfa",
                        "installed_by": ["subworkflows"]
                    },
                    "utils_nfvalidation_plugin": {
                        "branch": "master",
                        "git_sha": "5caf7640a9ef1d18d765d55339be751bb0969dfa",
                        "installed_by": ["subworkflows"]
                    }
                }
            }
        }
    }
}
