Workflows

kraken23 shovill3 taxonomy_krona_chart3 BLAST2 fastp2 Minimap22 NGSUtils2 picard_samtofastq2 FLASH1 SAMtools1 More...

Galaxy6

Virology4 exploration2 kraken2 Assembly1 blast1 DE_NOVO1 identification1 mapping1 reads_selection1 Virus1 More...

johan Rollin4 phytopat gembloux1 johan Rollin1

Integrated and Urban Plant Pathology Laboratory6 Intergalactic Workflow Commission (IWC)91 nf-core82 BioBB Building Blocks80 Australian BioCommons44 Workflows and Distributed Computing40 Galaxy Australia30 ERGA Assembly22 GalaxyProject SARS-CoV-221 usegalaxy-eu20 QCIF Bioinformatics20 Sydney Informatics Hub17 UNLOCK15 COMPSs Tutorials14 Galaxy Training Network13 NIH CFDE Playbook Workflow Partnership13 PNDB12 EuroScienceGateway11 eFlows4HPC general11 MGnify9 Galaxy Climate8 OME8 PerMedCoE8 IBISBA Workflows7 yPublish - Bioinfo tools7 Laserfarm applications to European demonstration sites7 CWL workflow SARS-CoV-26 EJPRD WP13 case-studies workflows6 HoloFood at MGnify6 Tree of Life Genome Analysis6 EGA6 IMBforge5 UX trial team5 iPC: individualizedPaediatricCure5 Specimen Data Refinery5 Cluster Emergent del Cervell Humà5 Seq4AMR5 Biodiversity Genomics Europe (general)5 iBOL Europe Museum Skimming5 NanoGalaxy4 SANBI Pathogen Bioinformatics4 Biodata Analysis Group4 Tree of Life Genome Assembly4 Generalized Open-Source Workflows for Atomistic Molecular Dynamics Simulations of Viral Helicases4 UFZ - Image Data Management and Processing Workflows4 SARS-CoV-2 Data Hubs3 Snakemake-Workflows3 ODA3 CO2MICS Lab3 EU-Openscreen3 TRON gGmbH3 TRE-FX3 Euro-BioImaging3 ERGA Annotation3 Scipion CNB3 Bioinformatics Laboratory for Genomics and Biodiversity (LBGB)3 BY-COVID (general)3 Chemical Data Lab3 NHM Clark group3 Proteomics CEITEC3 FAIR-EASE3 nf-core viralrecon2 V-Pipe2 EOSC-Life - Demonstrator 7: Rare Diseases2 Pawsey Supercomputing Research Centre2 SeBiMER2 Applied Computational Biology at IEG/HMGU2 INFRAFRONTIER workflows2 TransBioNet2 CRC Cohort2 Workflows Australia2 Medizinisches Proteom-Center, Medical Bioinformatics2 usegalaxy.be workflows2 Air Quality Prediction2 Read2Map2 ParslRNA-Seq: an efficient and scalable RNAseq analysis workflow for studies of differentiated gene expression2 KircherLab2 Apis-wings2 BioDT Use Case 4.1.1.2 Ecosystem services2 MISTIC2 BSC-CES2 Black Ochre Data Labs2 Workflows for geographic science2 Katdetectr2 ANSES-Ploufragan2 WP7 - Earthquakes2 Pillar III: Urgent computing for natural hazards2 CholGen2 Peter Menzel's Team2 Genome Data Compression Team2 RECETOX SpecDatRI2 bonohulab2 BioImage Informatics and Analysis Workflows2 CDPP2 NMR Workflow1 COVID-19 PubSeq: Public SARS-CoV-2 Sequence Resource1 Italy-Covid-data-Portal1 EOSC-Life-WP6-Demos1 EOSC-Life WP31 MOLGENIS1 Janis1 IAA-CSIC1 FAME1 CHU Limoges - UF9481 Bioinformatique / CNR Herpesvirus1 HecatombDevelopment1 OpenEBench1 Bioinformatics and Biostatistics (BIO2 ) Core1 VIB Bioinformatics Core1 Single Cell Unit1 emo-bon1 CINECA1 Toxicology community1 Gyn Department1 AGRF BIO1 X-omics1 CAPSID1 Edinburgh Genomics1 NBIS1 BCCM_ULC1 Computational Science at HZDR1 Big data in biomedicine1 Guigó lab1 Statistical genetics1 Delineating Regions-of-interest for Mass Spectrometry Imaging by Multimodally Corroborated Spatial Segmentation1 Bioinformatics Unit @ CRG1 ELIXIR Proteomics1 IRRI Bioinformatics Group1 Zavolan Lab1 Metabolomics-Reproducibility1 NGFF Tools1 Bioinformatics workflows for life science1 Helmholtz Scientific Project Workflow Platform1 BY-COVID Baseline Use Case: SARS-CoV-2 Vaccine(s) effectiveness in preventing SARS-CoV-2 infection1 Lake Erken modelling setup1 EOSC-Life WP3 OC Team, cross RI project1 ARA-dev1 Mendel Centre for Plant Genomics and Proteomics1 WP5 - Volcanoes1 WP6 - Tsunamis1 Metagenomic tools1 Pillar I: Manufacturing1 Polygenic Score Catalog1 MLme: Machine Learning Made Easy1 Dioscuri TDA1 MMV-Lab1 EMBL-CBA1 EBP-Nor1 Evaluation of Swin Transformer and knowledge transfer for denoising of super-resolution structured illumination microscopy data1 Pangenome database project1 HP2NET - Framework for construction of phylogenetic networks on High Performance Computing (HPC) environment1 Building spatio-temporal workflows in Galaxy1 CEMCOF1 Jackson Laboratory NGS-Ops1 BRAIN - Biomedical Research on Adult Intracranial Neoplasms1 Institute for Human Genetics and Genomic Medicine Aachen1 Plant-Food-Research-Open1 WGGC1 ELIXIR Metabolomics1 Medvedeva Lab1 16S rRNA Analysis1 Protein-protein and protein-nucleic acid binding site prediction research1 Culhane Lab1 IDUN - Drug Delivery and Sensing1 ErasmusMC Clinical Bioinformatics1 MAXOMOD1 NkuyfqLab1 EnrichDO1 Application Security - Test Crypt4GH solutions1 RenLabBioinformatics1 National Computational Infrastructure (NCI) WorkflowHub team1 Into the deep1 CPM1 Research Data Management ICE-21 LiDAR1 Senckenberg Digital Collection and Biodiversity Information Technologies1 Astroparticle Lab1 QuackenbushLab1 Virus sequencing team1 SOS1 CSUbioinformatics1 SIMEXP1 Kasmanas1 More...

Independent Teams6

Work-in-progress3 Stable3