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Tool: picard_samtofastq3
2: Plant virus confirmation
Work-in-progress

Mapping against all plant virus then make contig out of the mapped reads then blast them.

Type: Galaxy

Creators: None

Submitter: johan Rollin

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BAM to FASTQ + QC v1.0
Stable

BAM-to-FASTQ-QC

General recommendations for using BAM-to-FASTQ-QC

Please see the Genome assembly with hifiasm on Galaxy Australia guide.

Acknowledgements

The workflow & the doc_guidelines template used are supported by the Australian BioCommons via Bioplatforms Australia funding, the Australian Research Data Commons (https://doi.org/10.47486/PL105) ...

Type: Galaxy

Creator: Gareth Price

Submitter: Johan Gustafsson

DOI: 10.48546/workflowhub.workflow.220.2

0: View complete virus identification
Work-in-progress

Non-functional workflow to get a global view of possibilities for plant virus classification.

Type: Galaxy

Creators: None

Submitter: johan Rollin

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