ProteinID SG PS Tutorial WF datasetCollection
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Workflow Type: Galaxy

Peptide and Protein ID using SearchGUI and PeptideShaker

Associated Tutorial

This workflows is part of the tutorial ProteinID SG PS Tutorial WF datasetCollection, available in the GTN

Tutorial Author(s): Florian Christoph Sigloch, Björn Grüning

SEEK ID: https://dev.workflowhub.eu/workflows/1171?version=2

ID	Name	Description
2	PeakPickerHiRes	PeakPickerHiRes
3	FileConverter	FileConverter
4	Search GUI	toolshed.g2.bx.psu.edu/repos/galaxyp/peptideshaker/search_gui/2.9.0
5	Peptide Shaker	toolshed.g2.bx.psu.edu/repos/galaxyp/peptideshaker/peptide_shaker/1.11.0
6	Select	Output: all identified contaminant proteins Grep1
7	Select	Output: all identified non-contaminant proteins Grep1
8	Select	Output: identified non-contaminant proteins, validated to be "Confident". Grep1

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Frozen 5.0 6c2cab0

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Created: 25th Jun 2024 at 11:05

Last updated: 25th Jun 2024 at 11:06