'Proteome Annotation'
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Workflow Type: Galaxy

Annotating a protein list identified by LC-MS/MS experiments

Associated Tutorial

This workflows is part of the tutorial 'Proteome Annotation', available in the GTN

Tutorial Author(s): Valentin Loux, Florence Combes, David Christiany, Yves Vandenbrouck

SEEK ID: https://dev.workflowhub.eu/workflows/1207?version=1

ID	Name	Description
3	Build tissue-specific expression dataset	toolshed.g2.bx.psu.edu/repos/proteore/proteore_tissue_specific_expression_data/retrieve_from_hpa/2019.02.27
4	Filter by keywords and/or numerical value	toolshed.g2.bx.psu.edu/repos/proteore/proteore_filter_keywords_values/MQoutputfilter/2019.03.11
5	ID Converter	toolshed.g2.bx.psu.edu/repos/proteore/proteore_id_converter/IDconverter/2019.03.07
6	ID Converter	toolshed.g2.bx.psu.edu/repos/proteore/proteore_id_converter/IDconverter/2019.03.07
7	Venn diagram	toolshed.g2.bx.psu.edu/repos/proteore/proteore_venn_diagram/Jvenn/2019.02.21
8	Add expression data	toolshed.g2.bx.psu.edu/repos/proteore/proteore_expression_rnaseq_abbased/rna_abbased_data/2019.03.07
9	Filter by keywords and/or numerical value	toolshed.g2.bx.psu.edu/repos/proteore/proteore_filter_keywords_values/MQoutputfilter/2019.03.11
10	GO terms classification and enrichment analysis	toolshed.g2.bx.psu.edu/repos/proteore/proteore_clusterprofiler/cluter_profiler/2019.02.18
11	Query pathway database	toolshed.g2.bx.psu.edu/repos/proteore/proteore_reactome/reactome_analysis/2019.03.05

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Created: 25th Jun 2024 at 11:10

Last updated: 25th Jun 2024 at 11:10