MaxQuant MSstatsTMT Training
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Download RO-CrateMaxQuant and MSstats for the analysis of TMT data
Associated Tutorial
This workflows is part of the tutorial MaxQuant MSstatsTMT Training, available in the GTN
Thanks to...
Tutorial Author(s): Klemens Fröhlich, Melanie Föll, Matthias Fahrner
Inputs
| ID | Name | Description | Type |
|---|---|---|---|
| Experimental design template | #main/Experimental design template | n/a |
|
| Input Dataset Collection | #main/Input Dataset Collection | n/a |
|
| MSstats annotation file | #main/MSstats annotation file | n/a |
|
Steps
| ID | Name | Description |
|---|---|---|
| 3 | MaxQuant | toolshed.g2.bx.psu.edu/repos/galaxyp/maxquant/maxquant/1.6.17.0+galaxy2 |
| 4 | MSstatsTMT | toolshed.g2.bx.psu.edu/repos/galaxyp/msstatstmt/msstatstmt/2.0.0+galaxy0 |
Outputs
| ID | Name | Description | Type |
|---|---|---|---|
| _anonymous_output_10 | #main/_anonymous_output_10 | n/a |
|
| _anonymous_output_11 | #main/_anonymous_output_11 | n/a |
|
| _anonymous_output_12 | #main/_anonymous_output_12 | n/a |
|
| _anonymous_output_4 | #main/_anonymous_output_4 | n/a |
|
| _anonymous_output_5 | #main/_anonymous_output_5 | n/a |
|
| _anonymous_output_6 | #main/_anonymous_output_6 | n/a |
|
| _anonymous_output_7 | #main/_anonymous_output_7 | n/a |
|
| _anonymous_output_8 | #main/_anonymous_output_8 | n/a |
|
| _anonymous_output_9 | #main/_anonymous_output_9 | n/a |
|
Version History
1.0 (latest) Created 16th Jul 2024 at 14:08 by Helena Rasche
Added/updated 4 files
Open
master914eb12
2.0 (earliest) Created 25th Jun 2024 at 11:13 by Helena Rasche
Added/updated 4 files
Frozen
2.0490f7d5
Creators and Submitter
Views: 378 Downloads: 136
Created: 25th Jun 2024 at 11:13
Last updated: 25th Jun 2024 at 11:13
Tags AttributionsNone
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