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7 Workflows matching the given criteria: (Clear all filters)
Tool: Trimmomatic7
trinity NG

roscoff hackathon

Associated Tutorial

This workflows is part of the tutorial De novo transcriptome assembly, annotation, and differential expression analysis, available in the GTN

Thanks to...

Tutorial Author(s): Anthony Bretaudeau, [Gildas Le ...

Type: Galaxy

Creators: None

Submitter: GTN Bot

De novo transcriptome reconstruction with RNA-Seq

De novo transcriptome reconstruction with RNA-Seq

Associated Tutorial

This workflows is part of the tutorial De novo transcriptome reconstruction with RNA-Seq, available in the GTN

Thanks to...

Tutorial Author(s): Mallory Freeberg, [Mo ...

Type: Galaxy

Creators: None

Submitter: GTN Bot

Identification of somatic and germline variants from tumor and normal sample pairs tutorial

Identification of somatic and germline variants from tumor and normal sample pairs tutorial

Associated Tutorial

This workflows is part of the tutorial Identification of somatic and germline variants from tumor and normal sample pairs, available in the GTN

Features

  • Includes [Galaxy Workflow ...

Type: Galaxy

Creators: None

Submitter: GTN Bot

GTN - Sequence Analyses - Removal of human reads from SARS-CoV-2 sequencing data

Removal of human reads from SARS-CoV-2 sequencing data

Associated Tutorial

This workflows is part of the tutorial Removal of human reads from SARS-CoV-2 sequencing data, available in the GTN

Thanks to...

Tutorial Author(s): Wolfgang Maier

[![gtn star ...

Type: Galaxy

Creators: None

Submitter: GTN Bot

Somatic-Variant-Discovery-from-WES-Data-Using-Control-FREEC

This workflow is created as part of a tutorial listed on GTN. The workflow shows the steps in human copy number variance detection using the Contrl_FREEC tool.

Associated Tutorial

This workflows is part of the tutorial Somatic Variant Discovery from WES Data Using Control-FREEC, available in the GTN

Features

  • Includes [Galaxy ...

Type: Galaxy

Creators: None

Submitter: GTN Bot

Identification of the binding sites of the T-cell acute lymphocytic leukemia protein 1 (TAL1)

Identification of the binding sites of the T-cell acute lymphocytic leukemia protein 1 (TAL1)

Associated Tutorial

This workflows is part of the tutorial Identification of the binding sites of the T-cell acute lymphocytic leukemia protein 1 (TAL1), available in the GTN

Features

  • Includes [Galaxy Workflow ...

Type: Galaxy

Creators: None

Submitter: GTN Bot

From Fastqs to VCFs and BAMs

From Fastqs to VCFs and BAMs

Associated Tutorial

This workflows is part of the tutorial Identifying tuberculosis transmission links: from SNPs to transmission clusters, available in the GTN

Thanks to...

Tutorial Author(s): Galo A. Goig, [Daniela ...

Type: Galaxy

Creators: None

Submitter: GTN Bot

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