CHROMEISTER chromosome comparison
1.0

Workflow Type: Galaxy

A workflow designed to compare chromosomes and study large-scale rearrangements using CHROMEISTER

Associated Tutorial

This workflows is part of the tutorial CHROMEISTER chromosome comparison, available in the GTN

Thanks to...

Tutorial Author(s): Esteban Perez-Wohlfeil

gtn star logo followed by the word workflows

Inputs

ID Name Description Type
Query chromosome #main/Query chromosome n/a
  • File
Reference chromosome #main/Reference chromosome n/a
  • File

Steps

ID Name Description
2 Chromeister toolshed.g2.bx.psu.edu/repos/iuc/chromeister/chromeister/1.5.a

Outputs

ID Name Description Type
Chromeister on input dataset(s): Comparison dotplot #main/Chromeister on input dataset(s): Comparison dotplot n/a
  • File
Chromeister on input dataset(s): Comparison matrix #main/Chromeister on input dataset(s): Comparison matrix n/a
  • File
Chromeister on input dataset(s): Comparison metainformation #main/Chromeister on input dataset(s): Comparison metainformation n/a
  • File
Chromeister on input dataset(s): Comparison score #main/Chromeister on input dataset(s): Comparison score n/a
  • File
Chromeister on input dataset(s): Detected events #main/Chromeister on input dataset(s): Detected events n/a
  • File
Chromeister on input dataset(s): Detected events plot #main/Chromeister on input dataset(s): Detected events plot n/a
  • File

Version History

1.0 (earliest) Created 25th Jun 2024 at 11:04 by Helena Rasche

Added/updated 4 files


Open master 2962572
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Views: 415   Downloads: 78

Created: 25th Jun 2024 at 11:04

Last updated: 25th Jun 2024 at 11:04

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