Workflow Type: Galaxy
Open
Downstream Single-cell RNA analysis with RaceID
Associated Tutorial
This workflows is part of the tutorial RaceID Workflow, available in the GTN
Thanks to...
Tutorial Author(s): Mehmet Tekman, Alex Ostrovsky
Inputs
ID | Name | Description | Type |
---|---|---|---|
Tabular Matrix | #main/Tabular Matrix | n/a |
|
Steps
ID | Name | Description |
---|---|---|
1 | Initial processing using RaceID | raceid_filtnormconf |
2 | Clustering using RaceID | raceid_clustering |
3 | Lineage computation using StemID | raceid_trajectory |
4 | Cluster Inspection using RaceID | raceid_inspectclusters |
5 | Cluster Inspection using RaceID | raceid_inspectclusters |
6 | Cluster Inspection using RaceID | raceid_inspectclusters |
7 | Lineage Branch Analysis using StemID | raceid_inspecttrajectory |
8 | Lineage Branch Analysis using StemID | raceid_inspecttrajectory |
Outputs
ID | Name | Description | Type |
---|---|---|---|
_anonymous_output_10 | #main/_anonymous_output_10 | n/a |
|
_anonymous_output_11 | #main/_anonymous_output_11 | n/a |
|
_anonymous_output_12 | #main/_anonymous_output_12 | n/a |
|
_anonymous_output_13 | #main/_anonymous_output_13 | n/a |
|
_anonymous_output_14 | #main/_anonymous_output_14 | n/a |
|
_anonymous_output_15 | #main/_anonymous_output_15 | n/a |
|
_anonymous_output_16 | #main/_anonymous_output_16 | n/a |
|
_anonymous_output_17 | #main/_anonymous_output_17 | n/a |
|
_anonymous_output_18 | #main/_anonymous_output_18 | n/a |
|
_anonymous_output_19 | #main/_anonymous_output_19 | n/a |
|
_anonymous_output_2 | #main/_anonymous_output_2 | n/a |
|
_anonymous_output_20 | #main/_anonymous_output_20 | n/a |
|
_anonymous_output_21 | #main/_anonymous_output_21 | n/a |
|
_anonymous_output_22 | #main/_anonymous_output_22 | n/a |
|
_anonymous_output_23 | #main/_anonymous_output_23 | n/a |
|
_anonymous_output_3 | #main/_anonymous_output_3 | n/a |
|
_anonymous_output_4 | #main/_anonymous_output_4 | n/a |
|
_anonymous_output_5 | #main/_anonymous_output_5 | n/a |
|
_anonymous_output_6 | #main/_anonymous_output_6 | n/a |
|
_anonymous_output_7 | #main/_anonymous_output_7 | n/a |
|
_anonymous_output_8 | #main/_anonymous_output_8 | n/a |
|
_anonymous_output_9 | #main/_anonymous_output_9 | n/a |
|
Version History
1.0 (earliest) Created 25th Jun 2024 at 11:10 by Helena Rasche
Added/updated 4 files
Open
master
c62970d
Creators and Submitter
Creators
Not specifiedSubmitter
Discussion Channel
Activity
Views: 228 Downloads: 62
Created: 25th Jun 2024 at 11:09
Last updated: 25th Jun 2024 at 11:10
Attributions
None