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24 Workflows matching the given criteria: (Clear all filters)
Tool: BEDTools24
Tutorial CLIPseq Explorer Demultiplexed PEAKachu eCLIP Hg38

CLIP-Seq data analysis from pre-processing to motif detection

Associated Tutorial

This workflows is part of the tutorial CLIP-Seq data analysis from pre-processing to motif detection, available in the GTN

Thanks to...

Tutorial Author(s): Florian Heyl, [Daniel ...

Type: Galaxy

Creators: None

Submitter: GTN Bot

sRNA Seq Step 1: Read Pre Processing And Removal Of Artifacts (no Grooming)

This workflow completes the first part of the small RNA-seq tutorial from read pre-processing to trimming.e

Associated Tutorial

This workflows is part of the tutorial Differential abundance testing of small RNAs, available in the GTN

Thanks to...

Tutorial Author(s): Mallory Freeberg ...

Type: Galaxy

Creators: None

Submitter: GTN Bot

Ecoli Comparison

Making sense of a newly assembled genome

Associated Tutorial

This workflows is part of the tutorial Making sense of a newly assembled genome, available in the GTN

Thanks to...

Tutorial Author(s): Anton Nekrutenko, [Delphine ...

Type: Galaxy

Creators: None

Submitter: GTN Bot

GTN - ChIP Seq - Formation Of Super Structures On Xi

Associated Tutorial

This workflows is part of the tutorial Formation of the Super-Structures on the Inactive X, available in the GTN

Features

Thanks to...

Workflow Author(s): Friederike Dündar, ...

Type: Galaxy

Creators: None

Submitter: GTN Bot

VGP assembly: training workflow

VGP assembly tutorial

Associated Tutorial

This workflows is part of the tutorial Vertebrate genome assembly using HiFi, Bionano and Hi-C data - Step by Step, available in the GTN

Thanks to...

Tutorial Author(s): Delphine Lariviere, [Alex ...

Type: Galaxy

Creators: None

Submitter: GTN Bot

Identification of the binding sites of the T-cell acute lymphocytic leukemia protein 1 (TAL1)

Identification of the binding sites of the T-cell acute lymphocytic leukemia protein 1 (TAL1)

Associated Tutorial

This workflows is part of the tutorial Identification of the binding sites of the T-cell acute lymphocytic leukemia protein 1 (TAL1), available in the GTN

Features

  • Includes [Galaxy Workflow ...

Type: Galaxy

Creators: None

Submitter: GTN Bot

ATAC-seq GTM

atac-seq

Associated Tutorial

This workflows is part of the tutorial ATAC-Seq data analysis, available in the GTN

Thanks to...

Tutorial Author(s): Lucille Delisle, Maria Doyle, [Florian ...

Type: Galaxy

Creators: None

Submitter: GTN Bot

CUT&RUN

CUT&RUN workflow used in GTN

Associated Tutorial

This workflows is part of the tutorial CUT&RUN data analysis, available in the GTN

Features

Type: Galaxy

Creators: None

Submitter: GTN Bot

scATAC-seq FASTQ to Count Matrix

Associated Tutorial

This workflows is part of the tutorial Pre-processing of 10X Single-Cell ATAC-seq Datasets, available in the GTN

Features

Thanks to...

Workflow Author(s): Pavankumar Videm

**Tutorial ...

Type: Galaxy

Creators: None

Submitter: GTN Bot

Find exons with the highest number of features

Galaxy 101

Associated Tutorial

This workflows is part of the tutorial Galaxy Basics for genomics, available in the GTN

Features

Type: Galaxy

Creators: None

Submitter: GTN Bot

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