Workflows

What is a Workflow?
577 Workflows visible to you, out of a total of 682

A comprehensive cancer NGS analysis and reporting pipeline

Type: Nextflow

Creator: Stephen Watts

Submitter: WorkflowHub Sandbox Bot

The pangenome graph construction pipeline renders a collection of sequences into a pangenome graph. Its goal is to build a graph that is locally directed and acyclic while preserving large-scale variation. Maintaining local linearity is important for interpretation, visualization, mapping, comparative genomics, and reuse of pangenome graphs

Type: Nextflow

Creators: Simon Heumos, Michael L Heuer

Submitter: WorkflowHub Sandbox Bot

Global Run-On sequencing analysis pipeline

Type: Nextflow

Creators: Edmund Miller, Ignacio Tripodi, Margaret Gruca

Submitter: WorkflowHub Sandbox Bot

A pipeline to demultiplex, QC and map Nanopore data

Type: Nextflow

Creators: Chelsea Sawyer, Yuk Kei Wan

Submitter: WorkflowHub Sandbox Bot

A Nanostring nCounter analysis pipeline

Type: Nextflow

Creators: Peltzer , Alexander & Mohr, Christopher

Submitter: WorkflowHub Sandbox Bot

MNase-seq analysis pipeline using BWA and DANPOS2.

Type: Nextflow

Creator: Harshil Patel

Submitter: WorkflowHub Sandbox Bot

Identify and quantify peptides from mass spectrometry raw data

Type: Nextflow

Creators: Leon Bichmann, Marissa Dubbelaar, Jonas Scheid, Steffen Lemke

Submitter: WorkflowHub Sandbox Bot

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