A community effort to collect a curated set of analysis pipelines built using Nextflow.
Web page: https://nf-co.re
Funding details:Related items
Teams: Intergalactic Workflow Commission (IWC), Vertebrate Genomes Pipelines in Galaxy, nf-core
Organizations: Bots, European Galaxy Team
Teams: nf-core
Organizations: National University of Ireland, Galway
Expertise: Bioinformatics
Bioinformatician in Stockholm, Sweden. Lead for nf-core and MultiQC projects.
A community effort to collect a curated set of analysis pipelines built using Nextflow.
Space: nf-core
Public web page: https://nf-co.re
Organisms: Not specified
Type: Nextflow
Creators: James A. Fellows Yates, Sofia Stamouli, Moritz E. Beber, Lauri Mesilaakso, Thomas A. Christensen II, Jianhong Ou, Mahwash Jamy, Maxime Borry, Rafal Stepien, Tanja Normark
Submitter: WorkflowHub Bot
Type: Nextflow
Creators: No author provided, Hadrien Gourlé, Daniel Straub, Sabrina Krakau
Submitter: WorkflowHub Bot
Phasing and imputation pipeline
From metagenomes to peptides
Type: Nextflow
Creators: Sabrina Krakau, Leon Kuchenbecker and Till Englert
Submitter: WorkflowHub Bot
Single-cell/nuclei pipeline for data derived from Oxford Nanopore
Pipeline to run and benchmark multiple sequence alignment tools.
A pipeline for ortholog fetching and analysis
GATK4 RNA variant calling pipeline
Nextflow rnafusion analysis pipeline, part of the nf-core community.