Teams: Data Coordination Centre
Organizations: UK Human Functional Genomics Initiative, University of Exeter
https://orcid.org/0009-0000-7536-523X
Expertise: Bioinformatics
Tools: Transcriptomics
Teams: Quadram Institute Bioscience - Bioinformatics
Organizations: Quadram Institute
https://orcid.org/0000-0001-7619-281X
Expertise: Bioinformatics, Genomics, Metabarcoding, Metagenomics, Microbiology, NGS, Python, Workflows
Tools: Genomics, Microbiology, Transcriptomics
Teams: Dalmolin Systems Biology Group
Organizations: Bioinformatics Multidisciplinary Environment, Dalmolin Systems Biology Group
https://orcid.org/0000-0001-7513-7376
Expertise: Bioinformatics, Metagenomics, Python, R, Systems Biology, Workflows
Tools: Nextflow, Transcriptomics
Expertise: Bioinformatics, Genomics, Machine Learning, Mathematical Modelling, Systems Biology
Tools: Python, Transcriptomics, database, networks
Expertise: science, Bioinformatics, Genetics
Tools: methods development, biology, Computer Science, open science, linux
Current FOSS projects at bitbucket, github.
Last known whereabouts: Mark Robinson's lab at Univ. Zurich.
I've been learning and teaching bioinformatics since ~2007.
Teams: EI Core Bioinformatics Group
Organizations: Earlham Institute
https://orcid.org/0000-0003-1360-7808
Expertise: Bioinformatics, Data Management, Genomics, High Performance Computing, NGS, Python, R, Scientific workflow developement, Software Engineering, Workflows
Tools: CWL, Conda, Databases, Galaxy, Genomics, Git, Java, Jupyter notebook, Machine Learning, Nextflow, Perl, Python, R, Single Cell analysis, Snakemake, Transcriptomics, WDL, Workflows, nf-core
Gemy Kaithakottil is a Senior Bioinformatician / Developer at the Earlham Institute
Teams: BAID Team
Organizations: Vidyasirimedhi Institute of Science and Technology
https://orcid.org/0000-0003-4425-2608
I'm Bundit, a current Ph.D. candidate in Information Science and Technology at the Natural Language Processing and Representation Learning Lab (NRL), Vidyasirimedhi Institute of Science and Technology (VISTEC), Thailand. I received a B.Sc. degree in Chemistry from Prince of Songkla University, Thailand and an M.S. degree in Biochemistry from Kasetsart University, Thailand.
My interdisciplinary research bridges the disciplines of Biochemistry, Molecular Biology, Chemistry, Pharmaceutical Sciences, ...
Teams: iBOL Europe Museum Skimming, iBOL Europe Barcoding, iBOL Europe Barcode Data, Biodiversity Genomics Europe (general)
Organizations: The Natural History Museum London
https://orcid.org/0000-0002-5246-0725
Expertise: Bioinformatics, Molecular Biology
Bioinformatician on Biodiversity Genomics Europe
Teams: Sydney Informatics Hub
Organizations: The University of Sydney
https://orcid.org/0000-0003-0662-9101
Expertise: Bioinformatics, Genomics, Genetics
Senior Bioinformatics Engineer - Sydney Informatics Hub | Australian BioCommons
Expertise: Bioinformatics
Expertise: Bioinformatics
Tools: CWL, Genomics, Python, R, Transcriptomics, Jupyter notebook
Hiroshima University, Graduate School of Integrated Sciences for life, Laboratory of Genome Informatics, Ph.D student GitHub: https://github.com/yonesora56
Expertise: Bioinformatics, Biochemistry
Tools: Python
Teams: NBIS, ERGA Assembly
Organizations: NBIS – National Bioinformatics Infrastructure Sweden
https://orcid.org/0000-0003-1675-0677
Expertise: Bioinformatics, Genomics, Scientific workflow developement, Workflows
I'm a bioinformatician for the National Bioinformatics Infrastrure Sweden. I specialise in de novo genome assembly and workflow development with Nextflow. I'm also a Nextflow ambassador and nf-core maintainer.
Teams: Protein-protein and protein-nucleic acid binding site prediction research
Organizations: Shandong University
https://orcid.org/0009-0003-5182-3533
Expertise: Bioinformatics
Expertise: Bioinformatics, Metagenomics, NGS, Scientific workflow developement, Software Engineering
Tools: Conda, Jupyter notebook, Python, R, Single Cell analysis, Snakemake
Expertise: Bioinformatics
Expertise: Bioinformatics, Cheminformatics
Computation Biologist @UT Southwestern
Expertise: Bioinformatics
Teams: RECETOX SpecDatRI, RECETOX, usegalaxy-eu, ELIXIR Metabolomics, Intergalactic Workflow Commission (IWC)
Organizations: Masaryk University, RECETOX
https://orcid.org/0000-0001-6744-996X
Expertise: Bioinformatics, Cheminformatics, Metabolomics, Python, R, Software Engineering, Workflows
Tools: Metabolomics, Python, R, Workflows, Mass spectrometry, Chromatography
Teams: Genome Data Compression Team
Organizations: Shenzhen University
https://orcid.org/0009-0007-9672-6728
Expertise: Bioinformatics
Tools: Workflows
Research Interest: Bioinformatics | Deep Learning | DevOps | Generative AI | Knowledge Graphs. Highly communicative, task oriented, feature responsive, time oriented, approachable, solution seeker and initiative taker focussed professional working across a wide variety of topics which includes bioinformatics involving genomes, transcriptomes, metagenomes and metatranscriptomes focussing on datasets coming from the plant, bacterial and fungal genome (Illumina Miseq, NextSeq, NovaSeq, PacBio, Oxford ...
Teams: ERGA Annotation, Bioinformatics Laboratory for Genomics and Biodiversity (LBGB)
Organizations: Genoscope
https://orcid.org/0000-0002-6621-9908
Expertise: Bioinformatics
Tools: Nextflow, Python, R, Genetic analysis, Single Cell analysis
Expertise: Bioinformatics
Tools: R, Transcriptomics
Teams: Cimorgh IT solutions
Organizations: cimorgh IT
Expertise: Bioinformatics, Genomics, Metagenomics, Microbiology, NGS, Python, R, bash, WDL
Tools: Mathematical Modelling, R, WDL
Expertise: Bioinformatics, Metabarcoding, Metagenomics, Microbiology
Teams: EOSC-Life WP3 OC Team, cross RI project, EOSC-Life WP3, Euro-BioImaging
Organizations: EOSC-Life, Euro-BioImaging
Expertise: Bioengineering, Bioinformatics, Computer Science, Data Management
Tools: Databases, Jupyter notebook, Python
Biomedical Engineer working on preclinical image dataset repository and cross researching RIs
Expertise: Bioinformatics, Genomics, Scientific workflow developement
Expertise: Bioinformatics, Genomics, Machine Learning
Tools: Python, R, Machine Learning
I am a Ph.D. student in Gong lab. I am interested in cancer genomics, including the mining of genetic risk determinants in cancer, functional prediction of genetic variants, tumor-associated molecular epidemiology, large-scale data integration, analysis, and mining, as well as the construction of bioinformatical data platforms.
Expertise: Bioinformatics
Expertise: Bioinformatics, Genomics, Metagenomics, Data Management
Tools: CWL, Jupyter notebook, Nextflow, Molecular Biology, Workflows, Microbiology, Transcriptomics, Perl, Python, R
Teams: EU-Openscreen
Organizations: Fraunhofer Institute for Translational Medicine and Pharmacology ITMP
https://orcid.org/0000-0002-8080-9170
Expertise: Bioinformatics, Cheminformatics, Machine Learning
Tools: Workflows
I am a bioinformatician and phylogenetics. I really love working on problems at the intersection of high-performance computing and scientific workflows applied to omics
Expertise: Bioinformatics, Computer Science, Data Management, Genetics, Genomics, Machine Learning, Metagenomics, NGS, Scientific workflow developement, Software Engineering
Tools: Databases, Galaxy, Genomics, Jupyter notebook, Machine Learning, Nextflow, nf-core, PCR, Perl, Python, R, rtPCR, Snakemake, Transcriptomics, Virology, Web, Web services, Workflows
Dad, husband and PhD. Scientist, technologist and engineer. Bibliophile. Philomath. Passionate about science, medicine, research, computing and all things geeky!
Expertise: Bioinformatics, Molecular Biology, Computer Science, NGS, Software Engineering
Teams: EU-Openscreen, OME
Organizations: Fraunhofer Institute for Translational Medicine and Pharmacology ITMP
https://orcid.org/0000-0002-1740-8390
Expertise: Cheminformatics, Bioinformatics
Teams: Bioinformatics Innovation Lab
Organizations: Pondicherry University
https://orcid.org/0000-0003-4854-8238
Expertise: Bioinformatics, Systems Biology, Machine Learning
Tools: Galaxy, Cytoscape, Databases, Jupyter notebook, R, Python
Assistant Professor (Research) at Department of Bioinformatics, School of Chemical & Biotechnology, SASTRA Deemed to be University
Teams: MAB - ATGC
Organizations: Centre National de la Recherche Scientifique (CNRS)
https://orcid.org/0000-0003-3791-3973
Expertise: Bioinformatics, Genomics, algorithm, Machine Learning, Metagenomics, NGS, Computer Science
Tools: Transcriptomics, Genomics, Python, C/C++, Web services, Workflows
Expertise: Bioinformatics, Biostatistics, Metabarcoding, Metagenomics
Teams: Harkany Lab
Organizations: Medical University of Vienna
https://orcid.org/0000-0001-5920-2190
Expertise: Systems Biology, Bioengineering, Bioinformatics, Neuroscience
Tools: Workflows, Machine Learning, Transcriptomics
Teams: GalaxyProject SARS-CoV-2, nf-core viralrecon, EOSC-Life - Demonstrator 7: Rare Diseases, iPC: individualizedPaediatricCure, EJPRD WP13 case-studies workflows, TransBioNet, OpenEBench, ELIXIR Proteomics
Organizations: Barcelona Supercomputing Center, ELIXIR
https://orcid.org/0000-0003-4929-1219
Expertise: Bioinformatics, Computer Science, AI, Machine Learning
Computer Engineer in Barcelona Supercomputing Center (BSC)
Expertise: Bioinformatics
Bioinformatician in Stockholm, Sweden. Lead for nf-core and MultiQC projects.
Teams: GalaxyProject SARS-CoV-2, EI Papatheodorou Group, BioFAIR
Organizations: Earlham Institute
https://orcid.org/0000-0003-3627-5340
Expertise: Bioinformatics
Tools: Galaxy
Teams: V-Pipe
Organizations: SIB - Swiss Institute of Bioinformatics
https://orcid.org/0000-0002-7561-0810
Expertise: Bioinformatics, Software Engineering
Medical doctor and bioinformatician
Developer from the Swiss Institute of Bioinformatics (SIB) Working at the Computational Biology Group (CBG) of ETH Zurich.
Diplom in Medicine. MSc in Bioinformatics and Proteomics.
I am also a ski teacher as a hobby.
Research Director @ INRAe
Teams: IBISBA Workflows
Organizations: Unspecified
Expertise: Bioinformatics
Tools: Workflows, Web services, Python
Teams: GalaxyProject SARS-CoV-2
Organizations: BC Centre for Disease Control
https://orcid.org/0000-0002-6178-3585
Expertise: Bioinformatics, Data Management, Molecular Biology
Tools: Databases, PCR, Workflows, Web services