Workflows

Detection and quantitation of N-termini (degradomics) via N-TAILS

Associated Tutorial

This workflows is part of the tutorial Detection and quantitation of N-termini (degradomics) via N-TAILS, available in the GTN

Thanks to...

Tutorial Author(s): Florian Christoph Sigloch, ...

16S Microbial Analysis with mothur (short)

Associated Tutorial

This workflows is part of the tutorial 16S Microbial Analysis with mothur (short), available in the GTN

Thanks to...

Workflow Author(s): Saskia Hiltemann

Tutorial Author(s): Saskia Hiltemann, ...

Workflow for GTN Pangeo Notebook in Galaxy - Introduction to Xarray

Associated Tutorial

This workflows is part of the tutorial Pangeo Notebook in Galaxy - Introduction to Xarray, available in the GTN

Thanks to...

Workflow Author(s): Anne Fouilloux

Tutorial Author(s): Anne Fouilloux ...

DIA library Training HEK Ecoli data

Associated Tutorial

This workflows is part of the tutorial Library Generation for DIA Analysis, available in the GTN

Thanks to...

Tutorial Author(s): Matthias Fahrner, Melanie Föll ...

Quantification using the MaxQuant tool

Associated Tutorial

This workflows is part of the tutorial Clinical Metaproteomics 4: Quantitation, available in the GTN

Thanks to...

Workflow Author(s): Subina Mehta

Tutorial Author(s): Subina Mehta, ...

This workflow will create a simple plot of a microbial sized genome (e.g. E. coli) using a couple of datasets like sequencing depth (bigwigs), gff3 formatted annotations, and some variants.

Associated Tutorial

This workflows is part of the tutorial Ploting a Microbial Genome with Circos, available in the GTN

Features

• Includes [Galaxy ...

16S Microbial Analysis with mothur (short)

Associated Tutorial

This workflows is part of the tutorial 16S Microbial Analysis with mothur (short), available in the GTN

Thanks to...

Workflow Author(s): Saskia Hiltemann

Tutorial Author(s): Saskia Hiltemann, ...

version 1.0, 160318, published at https://github.com/Stortebecker/secretome_prediction

Associated Tutorial

This workflows is part of the tutorial Secretome Prediction, available in the GTN

Thanks to...

Tutorial Author(s): Florian Christoph Sigloch, ...

Validate the NeoAntigen Candidates from FragPipe discovery through the PepQuery Novel search

Associated Tutorial

This workflows is part of the tutorial Neoantigen 4: PepQuery2 Verification, available in the GTN

Features

• Includes a Galaxy Workflow Report ...

Annotating a protein list identified by LC-MS/MS experiments

Associated Tutorial

This workflows is part of the tutorial Annotating a protein list identified by LC-MS/MS experiments, available in the GTN

Thanks to...

Tutorial Author(s): Valentin Loux, [Florence ...