Music Stage 3 - Preprocess Visualisations 1.0
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This workflows is part of the tutorial Evaluating Reference Data for Bulk RNA Deconvolution, available in the GTN
Features
- Includes Galaxy Workflow Tests
- Includes a Galaxy Workflow Report
- Uses Galaxy Workflow Comments
Thanks to...
Workflow Author(s): Morgan Howells
Tutorial Author(s): Morgan Howells
Tutorial Contributor(s): Carlos Chee Mendonça, Saskia Hiltemann, Morgan Howells, Björn Grüning, Wendi Bacon
Grants(s): DASH UK
Inputs
| ID | Name | Description | Type |
|---|---|---|---|
| Cell Proportions | #main/Cell Proportions | n/a |
|
Steps
| ID | Name | Description |
|---|---|---|
| 1 | Remove beginning | Remove beginning1 |
| 2 | Collapse Collection | toolshed.g2.bx.psu.edu/repos/nml/collapse_collections/collapse_dataset/5.1.0 |
| 3 | Compute diff error | toolshed.g2.bx.psu.edu/repos/devteam/column_maker/Add_a_column1/2.1 |
| 4 | cut diff error | Cut1 |
| 5 | Join subsamples | toolshed.g2.bx.psu.edu/repos/iuc/collection_column_join/collection_column_join/0.0.3 |
| 6 | Remove header | Remove beginning1 |
| 7 | Transpose | toolshed.g2.bx.psu.edu/repos/iuc/datamash_transpose/datamash_transpose/1.8+galaxy1 |
Outputs
| ID | Name | Description | Type |
|---|---|---|---|
| Error Table | #main/Error Table | n/a |
|
| Results Table | #main/Results Table | n/a |
|
Version History
master
Creators and Submitter
Views: 2110 Downloads: 304 Runs: 0
Created: 2nd Jun 2025 at 10:59
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Organizations: Galaxy
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