Blockclust 1.1.0 Clustering 4.0
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Run on GalaxySmall Non-coding RNA Clustering using BlockClust
Associated Tutorial
This workflows is part of the tutorial Small Non-coding RNA Clustering using BlockClust, available in the GTN
Features
- Includes Galaxy Workflow Tests
Thanks to...
Tutorial Author(s): Pavankumar Videm
Inputs
| ID | Name | Description | Type |
|---|---|---|---|
| blockclust_input | #main/blockclust_input | n/a |
|
Steps
| ID | Name | Description |
|---|---|---|
| 1 | Samtools sort | toolshed.g2.bx.psu.edu/repos/devteam/samtools_sort/samtools_sort/2.0.2 |
| 2 | BlockClust | toolshed.g2.bx.psu.edu/repos/rnateam/blockclust/blockclust/1.1.0 |
| 3 | Sort | toolshed.g2.bx.psu.edu/repos/bgruening/text_processing/tp_sort_header_tool/1.1.1 |
| 4 | blockbuster | toolshed.g2.bx.psu.edu/repos/rnateam/blockbuster/blockbuster/0.1.2 |
| 5 | BlockClust | toolshed.g2.bx.psu.edu/repos/rnateam/blockclust/blockclust/1.1.0 |
Outputs
| ID | Name | Description | Type |
|---|---|---|---|
| blockbuster_out | #main/blockbuster_out | n/a |
|
| clusters_bed | #main/clusters_bed | n/a |
|
| model_based_pred_bed | #main/model_based_pred_bed | n/a |
|
| tags_bed | #main/tags_bed | n/a |
|
Version History
master
Creators and Submitter
Views: 48 Downloads: 5 Runs: 0
Created: 2nd Jun 2025 at 11:03
Tags AttributionsNone
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Organizations: Galaxy
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