Tree Building (imported from uploaded file) 1.0
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Run on GalaxyTree building for "Phylogenetics - Back to basics"
Associated Tutorial
This workflows is part of the tutorial Phylogenetics - Back to basics, available in the GTN
Features
- Includes Galaxy Workflow Tests
Thanks to...
Workflow Author(s): Helena Rasche, Michael Charleston
Tutorial Author(s): Michael Charleston
Tutorial Contributor(s): Adam Taranto, Melissa Burke, Patrick Capon
Inputs
| ID | Name | Description | Type |
|---|---|---|---|
| Input FASTA Sequence File | #main/Input FASTA Sequence File | This should be a fasta formatted file with multiple sequences. |
|
Steps
| ID | Name | Description |
|---|---|---|
| 1 | MAFFT | toolshed.g2.bx.psu.edu/repos/rnateam/mafft/rbc_mafft/7.508+galaxy1 |
| 2 | FASTTREE | toolshed.g2.bx.psu.edu/repos/iuc/fasttree/fasttree/2.1.10+galaxy1 |
| 3 | IQ-TREE | toolshed.g2.bx.psu.edu/repos/iuc/iqtree/iqtree/2.1.2+galaxy2 |
Outputs
| ID | Name | Description | Type |
|---|---|---|---|
| output | #main/output | n/a |
|
| outputAlignment | #main/outputAlignment | n/a |
|
| treefile | #main/treefile | n/a |
|
Version History
master
Creators and Submitter
Views: 47 Downloads: 7 Runs: 0
Created: 2nd Jun 2025 at 10:58
AttributionsNone
Related items
Teams: Galaxy Training Network
Organizations: Galaxy
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Galaxy is an open, web-based platform for accessible, reproducible, and transparent computational biological research.
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- Transparent: Users share and publish analyses via interactive pages that can enhance analyses with user annotations.
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Teams: Galaxy Training Network
Web page: https://galaxyproject.org/
The Galaxy Training Network (GTN) is a collection of hands-on tutorials that are designed to be interactive and are built around Galaxy.
These tutorials can be used for learning and teaching how to use Galaxy for general data analysis, as well as a wide array of hands-on tutorials covering specific domains such as assembly, RNA-Seq analysis, deep learning, climate analysis, and more!
