Workflow Type: Galaxy

Visualization of RNA-Seq results with heatmap2

Associated Tutorial

This workflows is part of the tutorial Visualization of RNA-Seq results with heatmap2, available in the GTN

Features

Thanks to...

Tutorial Author(s): Maria Doyle

gtn star logo followed by the word workflows

Inputs

ID Name Description Type
heatmap_genes heatmap_genes n/a
  • File
normalized_counts normalized_counts n/a
  • File

Steps

ID Name Description
2 Join two Datasets join1
3 Cut Cut1
4 Transpose toolshed.g2.bx.psu.edu/repos/iuc/datamash_transpose/datamash_transpose/1.1.0
5 heatmap2 toolshed.g2.bx.psu.edu/repos/iuc/ggplot2_heatmap2/ggplot2_heatmap2/2.2.1+galaxy1

Outputs

ID Name Description Type
heatmap_pdf heatmap_pdf n/a
  • File

Version History

4.0 (earliest) Created 2nd Jun 2025 at 11:06 by GTN Bot

Added/updated 4 files


Open master ac3e16d
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Activity

Views: 72   Downloads: 8   Runs: 0

Created: 2nd Jun 2025 at 11:06

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Total size: 41.8 KB
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