Workflows

Metaproteomics tutorial

Associated Tutorial

This workflows is part of the tutorial Metaproteomics tutorial, available in the GTN

Thanks to...

Tutorial Author(s): Timothy J. Griffin, Pratik Jagtap, ...

Metatranscriptomics analysis using microbiome RNA-seq data (short)

Associated Tutorial

This workflows is part of the tutorial Metatranscriptomics analysis using microbiome RNA-seq data (short), available in the GTN

Features

• Includes Galaxy Workflow Tests ...

Create a protein Fusion database through the Arriba workflow

Associated Tutorial

This workflows is part of the tutorial Neoantigen 1: Fusion-Database-Generation, available in the GTN

Features

• Includes a Galaxy Workflow Report ...

Visualize Climate data with Panoply netCDF viewer

Associated Tutorial

This workflows is part of the tutorial Getting your hands-on climate data, available in the GTN

Thanks to...

Workflow Author(s): Anne Fouilloux

Tutorial Author(s): Anne Fouilloux

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Identification of the micro-organisms in a beer using Nanopore sequencing

Associated Tutorial

This workflows is part of the tutorial Identification of the micro-organisms in a beer using Nanopore sequencing, available in the GTN

Features

• Includes Galaxy Workflow Tests ...

From Copernicus Sentinel 5P data to panoply visualization of volcanic activity impact to atmosphere

Associated Tutorial

This workflows is part of the tutorial Sentinel 5P data visualisation, available in the GTN

Thanks to...

Workflow Author(s): Marie Jossé

Tutorial Author(s): Marie Josse ...

Protein FASTA Database Handling

Associated Tutorial

This workflows is part of the tutorial Protein FASTA Database Handling, available in the GTN

Thanks to...

Tutorial Author(s): Florian Christoph Sigloch, [Björn ...

Generating non-reference protein database for FragPipe discovery

Associated Tutorial

This workflows is part of the tutorial Neoantigen 2: Non-Reference-Database-Generation, available in the GTN

Features

• Includes a Galaxy Workflow Report ...

Process argo data with the Pangeo Ecosystem and visualise them with Ocean Data View (ODV)

Associated Tutorial

This workflows is part of the tutorial Analyse Argo data, available in the GTN

Thanks to...

Workflow Author(s): Marie Jossé

Tutorial Author(s): Marie Josse ...

Discovery workflow with SG/PS and MaxQuant to generate microbial peptides

Associated Tutorial

This workflows is part of the tutorial Clinical Metaproteomics 2: Discovery, available in the GTN

Thanks to...

Workflow Author(s): Subina Mehta

Tutorial Author(s): Subina Mehta, ...